Some tips...
1. It's good idea to run away if RNG screws you over, like if one of the enemy ninjas starts a combo on your ninja or you fail to evade an attack. Also you might want to run away before the 10th round completes else you lose your whole team, even if you win.
2. If you know you can defeat the opposing enemy easily, you c*e that fight to recover some health with a healer like Kabuto. Else just keep positioning and changing ninjas to try different combinations until you win, because ninjas don't lock in until they complete one fight.
3. Combo starters and damage soakers like Naruto, Kankuro, and GNW Kiba are pretty useful because you can have their puppet/clones take hits while having them start a combo on the first round. Kankuro's poison and his GNW's Ignite is really helpful in taking down opponents whose team is built with stall in mind(ex. earth mains).
4. Although not extremely useful for PVP, ninjas like Shika, Ino, Shino, etc are useful in Survival Trial against AI controlled teams. Since AI is predictable, you can trial and error your way to victory.
Being higher level should make survival trial easier, because the more difficult enemies should start appearing in "Trial Breakthrough." You might want to unlock Fire main as he helps a lot if your F2P, in sleeping and immobilizing enemy units. After your first few complete clears, it should get way easier as you can sweep most of Survival Trial.