There are ALOT of factors that can affect your power at a given time and you might not be at your highest possible power.
Since introduction of tactics, where you place your ninja matters
Since introduction of 8 gates, the move order of your ninja metters
Which ninja you have on team have always mattered
Which ninja is using which of your equipment matters (including considering the rune, magatama, refine etc stat on there)
So the question you have to ask yourself is, are you sure you are using the exact same EVERYTHING as you did when you recorded your old power.
P.S. sometime new group skill bonus does not apply immediately, move your ninja around in your formation then back should have it kick in if that is the case.